16S_rRNA系統解析

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^ “Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end illumina reads”. Applied and Environmental Microbiology 77 (11): 3846?52. (June 2011). doi:10.1128/AEM.02772-10. PMC 3127616. PMID 21460107. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3127616/.
^ a b “A method for high precision sequencing of near full-length 16S rRNA genes on an Illumina MiSeq”. PeerJ 4: e2492. (2016-09-20). doi:10.7717/peerj.2492. PMC 5036073. PMID 27688981. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036073/.
^ “The variability of the 16S rRNA gene in bacterial genomes and its consequences for bacterial community analyses”. PLOS ONE 8 (2): e57923. (2013-02-27). Bibcode: 2013PLoSO...857923V. doi:10.1371/journal.pone.0057923. PMC 3583900. PMID 23460914. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3583900/.
^ a b “Sensitivity and correlation of hypervariable regions in 16S rRNA genes in phylogenetic analysis”. BMC Bioinformatics 17 (1): 135. (March 2016). doi:10.1186/s12859-016-0992-y. PMC 4802574. PMID 27000765. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4802574/.
^ a b “A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria”. Journal of Microbiological Methods 69 (2): 330?9. (May 2007). doi:10.1016/j.mimet.2007.02.005. PMC 2562909. PMID 17391789. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2562909/.
^ a b “The variability of the 16S rRNA gene in bacterial genomes and its consequences for bacterial community analyses”. PLOS ONE 8 (2): e57923. (2013-02-27). Bibcode: 2013PLoSO...857923V. doi:10.1371/journal.pone.0057923. PMC 3583900. PMID 23460914. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3583900/.
^ a b c “Characterization of the Gut Microbiome Using 16S or Shotgun Metagenomics”. Frontiers in Microbiology 7: 459. (2016-01-01). doi:10.3389/fmicb.2016.00459. PMC 4837688. PMID 27148170. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4837688/.
^ “Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced bacterial genomes”. FEMS Microbiology Letters 228 (1): 45?9. (November 2003). doi:10.1016/S0378-1097(03)00717-1. PMID 14612235.
^ “16S ribosomal DNA amplification for phylogenetic study”. Journal of Bacteriology 173 (2): 697?703. (January 1991). doi:10.1128/jb.173.2.697-703.1991. PMC 207061. PMID 1987160. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC207061/.
^ ⇒http://www.hmpdacc.org/tools_protocols.php#sequencing Archived 2010-10-30 at the Wayback Machine.
^ a b “Phylogenetic analysis of Aquaspirillum magnetotacticum using polymerase chain reaction-amplified 16S rRNA-specific DNA”. International Journal of Systematic Bacteriology 41 (2): 324?5. (April 1991). doi:10.1099/00207713-41-2-324. PMID 1854644.
^ a b James, Greg (15 May 2018). “Universal Bacterial Identification by PCR and DNA Sequencing of 16S rRNA Gene”. PCR for Clinical Microbiology. Springer, Dordrecht. pp. 209?214. doi:10.1007/978-90-481-9039-3_28. ISBN 978-90-481-9038-6
^ a b ⇒“Diversity of uncultured microorganisms associated with the seagrass Halophila stipulacea estimated by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes”. Applied and Environmental Microbiology 62 (3): 766?71. (March 1996). PMC 167844. PMID 8975607. ⇒http://aem.asm.org/cgi/reprint/62/3/766.pdf.
^ “Microbial diversity in water and sediment of Lake Chaka, an athalassohaline lake in northwestern China”. Applied and Environmental Microbiology 72 (6): 3832?45. (June 2006). doi:10.1128/AEM.02869-05. PMC 1489620. PMID 16751487. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1489620/.
^ “Identification of species by multiplex analysis of variable-length sequences”. Nucleic Acids Research 38 (22): e203. (December 2010). doi:10.1093/nar/gkq865. PMC 3001097. PMID 20923781. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3001097/.
^ “Ribosomal DNA sequencing as a tool for identification of bacterial pathogens”. Current Opinion in Microbiology 2 (3): 299?305. (June 1999). doi:10.1016/S1369-5274(99)80052-6. PMID 10383862.
^ “Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases”. Clinical Microbiology Reviews 17 (4): 840?62, table of contents. (October 2004). doi:10.1128/CMR.17.4.840-862.2004. PMC 523561. PMID 15489351. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC523561/.
^ “Reverse transcription of 16S rRNA to monitor ribosome-synthesizing bacterial populations in the environment”. Applied and Environmental Microbiology 75 (13): 4589?98. (July 2009). doi:10.1128/AEM.02970-08. PMC 2704851. PMID 19395563. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2704851/.
^ “16S ribosomal DNA amplification for phylogenetic study”. Journal of Bacteriology 173 (2): 697?703. (January 1991). doi:10.1128/jb.173.2.697-703.1991. PMC 207061. PMID 1987160. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC207061/.
^ “Burkholderia thailandensis sp. nov., a Burkholderia pseudomallei-like species”. International Journal of Systematic Bacteriology 48 Pt 1 (1): 317?20. (January 1998). doi:10.1099/00207713-48-1-317. PMID 9542103.
^ Phylogenetic identification of uncultured pathogens using ribosomal RNA sequences. Methods in Enzymology. 235. (1994). pp. 205?222. doi:10.1016/0076-6879(94)35142-2. ISBN 978-0-12-182136-4. PMID 7520119. https://archive.org/details/bacterialpathoge0000unse_f8b6/page/205
^ “Phylogenetic analysis of the bacterial communities in marine sediments”. Applied and Environmental Microbiology 62 (11): 4049?59. (November 1996). PMC 168226. PMID 8899989. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC168226/.
^ “Next-generation sequencing of 16S ribosomal RNA gene amplicons”. Journal of Visualized Experiments (90). (August 2014). doi:10.3791/51709. PMC 4828026. PMID 25226019. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4828026/.

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